Title: Molecular Basis of Class A β-Lactamase Inhibition by Relebactam

Authors (7): J. üR. Brem, P. Hinchliffe, P. A. Lang, A. J. Mulholland, C. J. Schofield, J. Spencer, C. L. Tooke

Themes: Biocatalysis (2020)

DOI: 10.1128/aac.00564-19

Citations: 45

Pub type: article-journal

Publisher: American Society for Microbiology

Issue: 10

License:

Publication date(s): 2019/08/05 (print) 2019/09/23 (online)

Pages:

Volume: 63 Issue: 10

Journal: Antimicrobial Agents and Chemotherapy

Link: https://syndication.highwire.org/content/doi/10.1128/AAC.00564-19

URL: http://dx.doi.org/10.1128/aac.00564-19

ABSTRACT β-Lactamase production is the major β-lactam resistance mechanism in Gram-negative bacteria. β-Lactamase inhibitors (BLIs) efficacious against serine β-lactamase (SBL) producers, especially strains carrying the widely disseminated class A enzymes, are required. Relebactam, a diazabicyclooctane (DBO) BLI, is in phase 3 clinical trials in combination with imipenem for the treatment of infections by multidrug-resistant Enterobacteriaceae. We show that relebactam inhibits five clinically important class A SBLs (despite their differing spectra of activity), representing both chromosomal and plasmid-borne enzymes, i.e., the extended-spectrum β-lactamases L2 (inhibition constant 3\\u2009μM) and CTX-M-15 (21\\u2009μM) and the carbapenemases KPC-2, -3, and -4 (1 to 5\\u2009μM). Against purified class A SBLs, relebactam is an inferior inhibitor compared with the clinically approved DBO avibactam (9- to 120-fold differences in half maximal inhibitory concentration [IC50]). MIC assays indicate relebactam potentiates β-lactam (imipenem) activity against KPC-producing Klebsiella pneumoniae, with similar potency to avibactam (with ceftazidime). Relebactam is less effective than avibactam in combination with aztreonam against Stenotrophomonas maltophilia K279a. X-ray crystal structures of relebactam bound to CTX-M-15, L2, KPC-2, KPC-3, and KPC-4 reveal its C2-linked piperidine ring can sterically clash with Asn104 (CTX-M-15) or His/Trp105 (L2 and KPCs), rationalizing its poorer inhibition activity than that of avibactam, which has a smaller C2 carboxyamide group. Mass spectrometry and crystallographic data show slow, pH-dependent relebactam desulfation by KPC-2, -3, and -4. This comprehensive comparison of relebactam binding across five clinically important class A SBLs will inform the design of future DBOs, with the aim of improving clinical efficacy of BLI–β-lactam combinations.

Name Description Publised
AAC.00564-19-s0001.pdf Supl. data for Molecular Basis of Class A β-Lactamase Inhibition by Rele... 2019
Crystal structure of L2 complexed with relebactam (16 hour soak) ... 2019
Crystal structure of CTX-M-15 complexed with relebactam (16 hour soak) ... 2019
Crystal structure of KPC-2 complexed with relebactam (16 hour soak) ... 2019
Crystal structure of KPC-3 complexed with relebactam (16 hour soak) ... 2019
Crystal structure of KPC-4 complexed with relebactam (16 hour soak) ... 2019
Crystal structure of KPC-4 complexed with relebactam (1 hour soak) ... 2019
Crystal structure of KPC-3 ... 2019
Crystal structure of KPC-4 ... 2019
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